Additional file 5 of Minos: variant adjudication and joint genotyping of cohorts of bacterial genomes

Additional file 5 Supplementary Table S4. Results of calling simulated complex variants in the M. tuberculosis genome. Total length is the length of the ref allele. Columns 2–5 show the number of each type of variant added to make the complex variant. For example, the first set of variants was 3 SNPs in a window of 10bp, and no insertions or deletions. The second set was 3 SNPs, one insertion of 2bp, and one deletion of 2bp in a window of 10bp.