Cotesia glomerata genome [MPM_Cglom_v2.0/v2.3]

Genome assembly data associated with, Pinto et al. (2021). A chromosome-level genome assembly of the parasitoid wasp, Cotesia glomerata (Hymenoptera: Braconidae). J Hered. https://doi.org/10.1093/jhered/esab032 <br>If you use these data in your work, please cite this paper.<br>UPDATE: MPM_Cglom_v2.3 has been made available on GenBank and re-annotated by RefSeq (available here: https://www.ncbi.nlm.nih.gov/genome/?term=txid32391[orgn] ). Files in this folder should be used sparingly and generally only to reproduce analyses from Pinto et al. 2021.<br>Version of the genome finally accepted by NCBI almost exactly the same as v2.0 with some trimmed adapters, etc:MPM_Cglom_v2.3.fasta.gz - final NCBI accepted genome assembly.MPM_Cglom_v2.3.gff3.gz - final NCBI accepted genome annotation.<br>MPM_Cglom_v2.3.transcripts.fa.gz - final NCBI accepted transcripts.<br>MPM_Cglom_v2.3.proteins.fa.gz - final NCBI accepted proteins.<br>MPM_Cglom_v2.0.hic.gz - post-3D-DNA whole genome HiC contact map for visualization in Juicebox.MPM_Cglom_v2.0.assembly.gz - assembly overlay of HiC contact map (.hic) for Juicebox visualization.MPM_Cglom_v2.0.fasta.gz - Final annotated genome assembly with soft repeatmasking.MPM_Cglom_v2.0.gff3.gz - gff3 gene annotation file paired with "MPM_Cglom_v2.0.fasta"MPM_Cglom_v2.0.fasta.mod.EDTA.intact.gff3.gz - repeat and TE annotation paired with "MPM_Cglom_v2.0.fasta"MPM_Cglom_v2.0.proteins.fa.gz - list of annotated protein sequences from genome annotation.MPM_Cglom_v2.0.transcripts.fa.gz - list of annotated transcript sequences from genome annotation.<br>Refer to README.txt file for more information regarding this repository.<br><br><br>