The parameter Alignment Score of the Smith-Waterman algorithm in the quantitative measurement of homology.
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To calculate the Alignment Score of two compared sequences aligned by the HELIOS method, the BLOSUM62 substitution scoring matrix is adopted with gap opening and extension penalties equal to -10 and -0.5, respectively. Moreover, the “Nine ND5 protein sequences dataset” [53] is assumed in this study.
创建时间：
2022-11-21
