FigShare Raw Count Table.xlsx
收藏DataCite Commons2022-03-18 更新2024-07-28 收录
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https://figshare.com/articles/dataset/FigShare_Raw_Count_Table_xlsx/17031842/1
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资源简介：
Raw Count Table: Table containing the raw counts for the samples pn-gxd001 - pn-gxd072. Raw sequence reads were processed with the Python package Cutadapt v1.4.2 to remove any residual adapter contamination. Reads were subsequently trimmed to remove low-quality reads (option -trim_qual_left/right=25) and reads shorter than 40 nucleotides, using the PRINSEQ software v.lite-0.20.4. Trimmed reads were aligned to the Populus trichocarpa v3.0 transcriptome database using TopHat2 v2.0.10. A count table was generated using the Python package HTSeq v0.6.1.
提供机构：
figshare
创建时间：
2021-11-17
