Data for SCFT calculations in Membrane fission via transmembrane contact
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https://springernature.figshare.com/articles/dataset/Data_for_SCFT_calculations_in_Membrane_fission_via_transmembrane_contact/25407907/1
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The data herein correspond to lipid configurations during the fission of membrane tubes. Calculations were done using self-consistent field theory. These data were generated using the given code. Each data folder contains several sets of files, arranged as follows:
vtk files:
rhoA*.vtk - monomer densities for lipid tails
rhocB*.vtk - monomer head densities
win files:
win* - fields corresponding to densities
Free energies:
FEs - free energies along the pathway. Each row corresponds to a configuration (ordered the same way as vtk files and fields). The columns are: order parameter (from string method), free energy density, lipid density
Input files:
input.dat in the input file for that particular run.
An updated/evolving version of the code is provided at
https://github.com/PolymerTheory/SCFT_string
Note that some runs 'fix' the ends of the strings and some contain pathways beyond what is presented in the paper. These steps are useful in obtaining/optimizing the string. For technical details, please see the paper or the github repository, and for more information contact Russell Spencer using the contact information provided in the paper.
提供机构:
figshare
创建时间:
2024-03-31



