Additional file 2: Figure S1. of Transcription coupled repair and biased insertion of human retrotransposon L1 in transcribed genes

Control for the efficiency of the complementation of CSA-deficient cells. Figure S2. L1 retrotransposition rate is not significantly different in CSA-deficient cells (CSA-) and in the stably complemented CSA-deficient cells (CSA+). Figure S3. FPKM counts for Encode genes expressed in HeLa. Figure S4. The tendency of de novo L1 elements to insert in the antisense orientation within genes is lost in the cells deficient in the TCR pathway (CSA- and XPD- cells). Figure S5. Model of regulation of L1 insertion in genes by the TCR pathway. (ZIP 241 kb)