allgenes_8_partitions_strategy_E

All genes with commands for MrBayes. This partitioning strategy was deemed the best using Bayes factors. The dataset has 8 partitions and is referred to as strategy E in the manuscript. Each gene or gene fragment is separated in its own block; protein-coding genes treated with Gblocks; rDNA aligned via secondary structure and with ambiguous regions excluded if the standard deviation of length in that region is > 1.