uORF-connected transcripts.

This table contains uORF-connected transcripts (IDs in column H) constructed using either GTEx or Splam-supported splice junctions. For each construct, we made available which uORF it originates from (column C) and the splice junction coordinates (column F) connecting the uORF to a downstream CDS that belongs to a reference transcript in GENCODE (column J). Note that the junction coordinates follow a 1-based, fully closed interval system used in a GTF/GFF format. The level of support for each junction, read coverage if GTEx-supported and predicted score if Splam-supported, is available in column G. The table also includes the ColabFold-predicted average pLDDT scores for each construct and its reference, as well as their differences– δ. A transcript or reference with a missing average pLDDT value (notated with a ‘.’) are the ones skipped due to their CDS length being > 2k amino acids. Columns M and N tell if the reference is an NMD (according to GENCODE) or a MANE transcript. Columns R and S contain the novel CDS lengths and protein sequences encoded by each uORF-connected transcript. (XLSX)