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Cross-validation of SNVs detected by reciprocal alignment (Steps B and C).

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https://figshare.com/articles/dataset/_Cross_validation_of_SNVs_detected_by_reciprocal_alignment_Steps_B_and_C_/422277
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aSNVs found by whole-genome alignment after correcting for Step A (Table 4). bUnambiguous SNVs detected by reciprocal alignment. cSNV detected by reciprocal alignment, and also found by whole-genome alignment. dSNV not detected by reciprocal alignment, but found by whole-genome alignment. eFalse negative due to SNV having an ambiguous base assignment. fFalse negative due to SNV missing from the reciprocal alignment. gSNV detected by reciprocal alignment, but not found by whole-genome alignment. hSNV detected by both reciprocal alignments and also whole-genome alignment (total % cross-validation in parentheses).
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2011-07-28
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