Additional file 2 of The transcriptional factor Clr-5 is involved in cellulose degradation through regulation of amino acid metabolism in Neurospora crassa

Additional file 2: Table S1. List of PCR primers used in this study. Table S2. The profiles of RNA-seq reads mapped to the genome of N. crassa and the differential expression analysis. Table S3. Genes showing significantly differential transcriptional levels in strain ∆clr-5 compared to the wild-type strain in 1×VMM with 2% Avicel. Table S4. GO analysis of the 371 genes with down-regulated expression levels in strain ∆clr-5 in 1×VMM with 2% Avicel. Table S5.Transcriptional levels of CAZyme genes in strain Δclr-5 when grown in Avicel medium with histidine or leucine as the sole nitrogen source. Table S6. The genes with significantly reduced transcript levels in strain ∆clr-5 relative to WT in response to histidine and leucine. Table S7. GO analysis of the 296 genes with down-regulated expression levels in strain ∆clr-5 relative to WT in response to histidine and leucine.