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Additional file 10 of Extensive remodeling of sugar metabolism through gene loss and horizontal gene transfer in a eukaryotic lineage

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Figshare2024-08-18 更新2026-04-08 收录
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https://springernature.figshare.com/articles/dataset/Additional_file_10_of_Extensive_remodeling_of_sugar_metabolism_through_gene_loss_and_horizontal_gene_transfer_in_a_eukaryotic_lineage/26727862/1
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Additional file 10: Table S3. Sugar porter HMM-based search in Wickerhamiella species. The hits obtained for each of the bitscore threshold values (10, 20 and 80) are presented. A BLASTp search against the NCBI database was performed for Wickerhamiella cacticola using the three thresholds to evaluate the number of false positives and false negatives. The threshold that yielded the best results was 20. The best BLASTp hits for relevant Wickerhamiella species (glucophilic without FFZ1 and fructophilic with and without FFZ1) are indicated.
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Lachance, Marc-André; Aires, Andreia; Gonçalves, Carla; Brito, Patrícia H.; Sampaio, José Paulo; Gonçalves, Paula; Silva, Margarida; Lagoas, Catarina; Paraíso, Francisca; Rosa, Carlos A.; Pontes, Ana
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2024-08-15
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