Replication Data for: Effects of acid rock drainage on microbial communities in alpine streams of the Pyrenees
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资源简介:
This dataset contains the microbial diversity data used in the associated article. Data for prokaryotes (16S) and eukaryotes (18S) have been obtained using metagenomic methods. In both cases, sequences are assigned to an ASV. Absolute abundances of each ASV are presented for each sample, and each ASV is associated with a specific taxonomic classification. Absolute abundances of each diatom species have been obtained using an optical microscope and classified morphologically. The absolute abundances of each diatom species are presented for each sample along with their corresponding full species names. Abbreviations used in the article for each diatom species are also indicated.
Tax_Assign_Prokaryotes: Dataset of prokaryote sequences with their respective taxonomical assignations.
- #ASV ID: Sequence identifyer
- num_ASV: Number assigned to each ASV
- A1, A2, A3, A4, A5: Samples from acidic streams
- N_A1, N_A2, N_A3, N_A4, N_A5, N_A6: Samples from non-acidic streams
- WC1, WC2, WC3, WC4, WC5, WC6, WC7, WC8, WC9, WC10: Samples from white-coated streams
- From "Kingdom" to "Genus": Taxonomical divisions in hierarchical order from left to right
Tax_Assign_Ekaryotes: Dataset of eukaryote sequences with their respective taxonomical assignations.
- #ASV ID: Sequence identifyer
- num_ASV: Number assigned to each ASV
- A1, A2, A3, A4, A5: Samples from acidic streams
- N_A1, N_A2, N_A3, N_A4, N_A5, N_A6: Samples from non-acidic streams
- WC1, WC2, WC3, WC4, WC5, WC6, WC7, WC8, WC9, WC10: Samples from white-coated streams
- From "Kingdom" to "Species": Taxonomical divisions in hierarchical order from left to right
Absolute_Abundances_Diatoms: Dataset of absolute abundances of each diatom species
- SITE: Region where sample was taken from.
- SAMPLE: Sample where the diatom species was found.
- CODE: Abreviation assigned during taxonomical identification.
- Genus: Taxonomical division in which that diatom species is classified
- Full_taxon_name: Includes genus, species and first identifyer(s) of that species.
- Num: Number of individuals of that species found in that sample.
提供机构:
CORA.Repositori de Dades de Recerca
创建时间:
2025-07-31



