five

Common transcripts between glands and J2.

收藏
NIAID Data Ecosystem2026-05-10 收录
下载链接:
https://figshare.com/articles/dataset/Common_transcripts_between_glands_and_J2_/30569118
下载链接
链接失效反馈
官方服务:
资源简介:
The root-knot nematode (RKN) Meloidogyne chitwoodi is a threat for potato production in the western United States (U.S.), negatively impacting potato yield and product value. Meloidogyne chitwoodi produce proteins, called effectors, in their esophageal glands that are secreted during parasitism and play integral roles in plant-nematode interactions. Because the esophageal glands are the main effector secretory organs, we isolated juvenile gland cells and performed gland transcriptome analysis with our newly improved genome annotation. The gland-specific transcriptome data gave us an enrichment of gland-localized genes, which was validated by in situ hybridization. The gland transcriptome analysis led to the identification of 125 effector candidates. One of the effectors that was highly expressed in the pre-parasitic J2 gland tissue, referred to as McGland26, was further characterized. Arabidopsis thaliana expressing McGland26 showed enhanced susceptibility to M. chitwoodi. However, the ectopic expression of McGland26 in planta did not suppress plant defenses, suggesting that this effector might be involved in processes other than interfering with plant immunity. Our data show that by using the gland transcriptome, a good quality genome annotation, and stringent selection criteria, we can increase the efficiency of effector identification, which can be used to develop more sustainable management tools.
创建时间:
2025-11-07
5,000+
优质数据集
54 个
任务类型
进入经典数据集
二维码
社区交流群

面向社区/商业的数据集话题

二维码
科研交流群

面向高校/科研机构的开源数据集话题

数据驱动未来

携手共赢发展

商业合作