GraphML files for protein sequence networks of glycoside hydrolase 19 homologues
收藏DaRUS2020-01-01 更新2026-04-16 收录
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https://darus.uni-stuttgart.de/citation?persistentId=doi:10.18419/DARUS-802
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资源简介：
GraphML files for undirected weighted graphs with nodes that represent protein sequences of glycoside hydrolase 19 homologues. Protein sequences were clustered by a threshold of 90% sequence identity to derive representative sequences. Pairwise sequence identity between two sequences was derived from global Needleman-Wunsch alignment. Protein sequence networks were generated with edge weights of pairwise sequence identity, filtered by a predefined threshold. Metadata of the nodes (e.g. annotations) and of the edges (the edge weights) were summarized in GraphML files.
提供机构：
University of Milano Bicocca
创建时间：
2020-01-01
