Additional file 1 of Whole-genome sequencing reveals adaptations of hairy-footed jerboas (Dipus, Dipodidae) to diverse desert environments
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Additional file 1: Table s1. Sampling information of 83 Dipus jerboas. Table s2. Definition of the environment types and the Dipus individuals living in these environments. Table s3. Sequencing information of 83 Dipus samples and one long-eared jerboa, Euchoreutes naso. Table s4. Summary information for SnpEff annotation of Dipus population genomic variants. Table s5. Pairwise FST values among the three Dipus species and eight populations. Table s6. Summary of f3-statistic. Table s7. Path sampling results for species delimitation analyses. Table s8. Genes under positive selection in D. sowerbyi from high altitude deserts. Table s9. GO enrichment result of PSGs in D. sowerbyi individuals from high-altitude deserts. Table s10. Allele frequency statistics of seven missense mutations of ATR gene. Table s11. Genes under positive selection in D. sowerbyi from hyper-arid deserts. Table s12. GO enrichment result of PSGs in D. sowerbyi individuals from hyper-arid deserts. Table s13. Allele frequency statistics of six missense mutations of Dmxl2 gene. Table s14. Genes under positive selection in D. sowerbyi from arid deserts. Table s15. GO enrichment result of PSGs in D. sowerbyi individuals from arid deserts. Table s16. KEGG pathways enrichment result of PSGs in D. sowerbyi individuals from arid desert. Table s17. Mouse phenotype enrichment of 203 PSGs in D. sowerbyi from arid deserts. Table s18. Summary of the GO categories of the candidate genes associated with energy homeostasis and hypertonicity adaptation.
提供机构:
Peng, Xingwen; Feijó, Anderson; Wen, Zhixin; Yang, Qisen; Cheng, Jilong; Li, Hong; Ge, Deyan; Xia, Lin
创建时间:
2023-08-31



