File S1 - Long Distance Linkage Disequilibrium and Limited Hybridization Suggest Cryptic Speciation in Atlantic Cod

Supporting Information file that includes Table S1, Figure S1, and Figure S2. Table S1. SNP associated genes and map position from SNP sequence alignment to cod genome using BLAT. See methods for details. Figure S1. Map of sample locations for Atlantic cod tissue samples distributed throughout the North Atlantic. Figure S2. FST between N and S types from either side of the North Atlantic (yellow – west, red – east) with linkage map distance across (A) LG2, (B) LG7 and (C) LG12. (PDF)