Additional file 9: of A comparison of heat-stress transcriptome changes between wild-type Arabidopsis pollen and a heat-sensitive mutant harboring a knockout of cyclic nucleotide-gated cation channel 16 (cngc16)

Sorted lists of differentially expressed transcripts in WT and cngc16 mutant. HS-dependent changes were sorted and extracted from the entire transcriptome analysis in Additional file 3. For genes listed in a given category, corresponding transcripts showed â Ľ2-fold change with an adjusted p-value â ¤0.01. a. Tally of 21 pre-existing transcriptome differences identified in a direct comparison between WT and cngc16 mutant pollen from unstressed (control/normal) plants. b. Tally of 471 HS-dependent transcriptome changes that were only classified as significant changes in WT. Genes shown include only WT-specific changes and do not include changes that were also observed to be in common with cngc16 (see Additional file 9d). c. Tally of 2305 HS-dependent transcriptome changes that were only classified as significant changes in cngc16. Genes shown include only cngc16-specific changes and do not include changes that were also observed to be in common with WT (see Additional file 9d). d. Tally of 1631 HS-dependent transcriptome changes observed in both WT and cngc16. Genes shown include only common changes and do not include changes that were categorized as specific to WT or cngc16 (see Additional file 9b and c, respectively). e. 192 transcriptome differences from a direct comparison between heat-stressed WT and cngc16 mutant pollen. (XLSX 1638 kb)