Artificial single-cell datasets with paths between cell clusters used for singleCellHaystack manuscript

An archive containing 100 artificial single-cell datasets. The data of each dataset is an R data file (.rda). The file names have the following format: splatter_<i>thousands_of_cells</i>kCells_paths_set_<i>set_id</i>.rda' For example: "splatter_1kCells_paths_set_9.rda" represents the 9th set containing 1000 cells made using the "paths" option of splatSimulate. You can import the data into R using the load() function. Each dataset includes the following R objects: 1) counts : the number of reads or UMIs for each gene in each cell2) gene.data : a summary of the data generated by Splatter3) params : the parameters used to generate the dataset