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Complete Genome Sequence of an Aeromonas rivuli Strain Isolated from Ready-to-Eat Food - Data Files

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Zenodo2022-01-08 更新2026-04-07 收录
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This dataset contains input and intermediate files of the bcgTree analysis described in the Schwartz <em>et al</em>. MRA manuscript entitled “Complete Genome Sequence of an <em>Aeromonas rivuli</em> Strain Isolated from Ready-to-Eat Food”. <strong>File name</strong> <strong>Description</strong> ‘<em>Aeromonadaceae</em> identifier’.fa Amino acid FASTA file of the translated CDS sequences of a strain X (bcgTree input file) full_alignment.concat.fa Alignment of the concatenated amino acid sequences of 107 single-copy core genes that is used for phylogenetic tree calculation in bcgTree (bcgTree intermediate file) In the bcgTree files, the <em>Aeromonadaceae</em> sequences were named/abbreviated as follows: <strong>Sequence name in the bcgTree file</strong> <strong>Description</strong> AAZUK01-1 <em>Tolumonas lignilytica </em>BRL6-1 Aeromonas-caviae <em>Aeromonas caviae </em>NCTC 12244 Aeromonas-dhakensis <em>Aeromonas dhakensis </em>CIP 107500 Aeromonas-hydrophila <em>Aeromonas hydrophila </em>ATCC 7966 Aeromonas-rivuli <em>Aeromonas rivuli </em>DSM 22539 Aeromonas-rivuli-20-VB00005 <em>Aeromonas rivuli </em>20-VB00005 Aeromonas-veronii <em>Aeromonas veronii </em>CECT 4257 CP001616-1 <em>Tolumonas auensis </em>DSM 9187 JACHGR01-1 <em>Tolumonas osonensis </em>DSM 22975

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2022-01-08
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