Prostate_cancer_cross-platform_results

Cross-platform integrative analysis results from biological comparisons performed between various prostate cancer stages presented in "The Transcriptomic Landscape of Prostate Cancer Development and Progression: An Integrative Analysis" study. Data were integrated using our integrative pipeline available at https://github.com/JMarzec/transcriptomics_data_integration.<br>Biological comparison:TvsN - results from Primary tumour (T) versus Benign prostate (N) comparisonHvsN - results from HGPIN (T) versus Benign prostate (N) comparisonTvsH - results from Primary tumour (T) versus HGPIN (H) comparisonTmvsT - results from Metastatic primary tumour (Tm) versus Primary tumour (T) comparisonMvsT - results from Metastasis (M) versus Primary tumour (T) comparison<br><br>Results description:<br>ensembl_id - Ensembl gene ID<br>hgnc_symbol - HGNC gene symbol<br>description - HGNC gene name<br>chromosome_name - gene chromosomal location (chromosome name)<br>band - gene chromosomal location (chromosome band)<br>strand - gene chromosomal location (chromosome strand)<br>start_position - gene start location (base pair position)<br>end_position - gene end location (base pair position)<br>rank_[biological_comparison] - data integration-based gene ranking in individual biological comparisons<br>rank_[biological_comparison]_percentile - data integration-based gene ranking (percentile) in individual biological comparisons<br>average_log2fc_[biological_comparison] - expression fold-changes (in log2 scale) observed in individual biological comparisons<br>combined_p_[biological_comparison] - combined P-values observed in individual biological comparisons<br>