Data from: Rewilding shows differential gene expression in sympatric Physella acuta (Draparnaud, 1805) snail lineages

This dataset contains 3,302 differentially expressed genes (DEGs) from the
freshwater snail Physella acuta, identified through transcriptomic
analysis comparing environmental conditions (Field vs. Lab) across both
invasive (A) and native (B) lineages. The FASTA file includes sequences
for both upregulated (URGs) and downregulated genes (DRGs) from four
pairwise comparisons: Field A vs. Field B, Field B vs. Lab B, Field A vs.
Lab A, and Lab A vs. Lab B. DEGs were consistently identified using two
independent RNA-seq analysis pipelines—STAR/Limma and
Kallisto/DESeq2—ensuring robustness of detection. Additionally, this
dataset includes a subset of 1,228 transcript sequences representing
orthologs of human and mouse MitoCarta genes. The MitoCarta database
catalogs nuclear-encoded mitochondrial proteins involved in ATP synthesis,
metabolism, and cellular stress responses. These sequences were identified
through transcriptome-wide similarity searches against the MitoCarta 3.0
reference set (Rath et al. 2021) using a genome-guided transcriptome
assembly derived from RNA-seq data of both laboratory and rewilded snails.
An accompanying CSV file is provided, categorizing each transcript ID
based on homology to the human database only, the mouse database only, or
both.