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资源简介：
Hi-C data for Galaxy training, dm6 cells.
应用场景：
创建时间：
2018-02-21
相关数据集
Additional file 3: Table S2. of HiC-bench: comprehensive and reproducible Hi-C data analysis designed for parameter exploration and benchmarking
HiC-bench input-output objects. The table summarizes the inputs and outputs of the TAD-calling task using three different methods with parameter values stored in the params files (column 2). The first
DataCite Commons2024-12-17 更新110
3D genomics across the tree of life reveals condensin II as a determinant of architecture type
We investigated genome folding across the eukaryotic tree of life. We find four general manifestations of genome organization at chromosome-scale that each emerge and disappear repeatedly over the cou
NIAID Data Ecosystem60
Identification of topologically associated domains (TADs) in peripheral blood CD34+ cells
We performed a Hi-C experiment on CD34+ cells isolated from peripheral blood and identifed topologically associated domains (TADs). Overall design: Two replicates of mobilized peripheral blood CD34+ c
NIAID Data Ecosystem40
Developmental stage specific chromosome architecture in human erythroid cells. Developmental stage specific chromosome architecture in human erythroid cells
This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series
NIAID Data Ecosystem80
3D genomics across the tree of life reveals condensin II as a determinant of architecture type
GAMinG script (python) and sequence file (.dat) to prepare files to run molecular dynamics in GROMACS (see ndb.rice.edu for more info regarding how to run the simulations). Two .hic maps and two sampl
NIAID Data Ecosystem50
