遇见数据集

Gene annotations and associated FASTA file of Antechinus flavipes (yellow-footed antechinus)

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Zenodo2021-08-16 更新2026-04-07 收录
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Gene annotations of <em>Antechinus flavipes</em> (yellow-footed antechinus) associated with the manuscript "A chromosome-level genome of <em>Antechinus flavipes</em> provides a reference for an Australian marsupial genus with male death after mating" (<em>Molecular Ecology Resources</em>, accepted). <strong>Annotation file and associated FASTA files for <em>A. flavipes</em> assembly AdamAnt. </strong><br> • AdamAnt.gff3.tar.gz: EVidenceModeler (EVM) gene model annotation file for <em>A. flavipes</em> assembly AdamAnt.<br> • AdamAnt.CDS.fa.tar.gz: EVM gene models coding sequences.<br> • AdamAnt.AA.fa.tar.gz: EVM gene models coding sequences translated into amino acid sequences. <strong>Annotation file and associated FASTA files for <em>A. flavipes</em> transcriptome assembly generated using ROPUS (Reference-guided Ortholog Pipeline for Unannotated species; see doi:10.5281/zenodo.3722900). </strong><br> • antechinus_flavipes_ROPUS_CDS_annotated.fa.tar.gz: ROPUS CDS set. Annotated using human as the reference species.<br> • antechinus_flavipes_ROPUS_AA_annotated.fa.tar.gz: ROPUS AA set. Translated using the CDS sequence. <br> • antechinus_flavipes_ROPUS_annotated.gff3.tar.gz: annotation file for gene expression analysis using the <em>A. flavipes </em>ROPUS CDS FASTA.

提供机构:
Seim, Inge
创建时间:
2021-08-16
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