MINUTE-ChIP example data
收藏DataCite Commons2025-01-15 更新2024-07-13 收录
下载链接：
https://figshare.scilifelab.se/articles/dataset/MINUTE-ChIP_example_data/25348405/1
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资源简介：
This collection contains an example MINUTE-ChIP dataset to run minute pipeline on, provided as supporting material to help users understand the results of a MINUTE-ChIP experiment from raw data to a primary analysis that yields the relevant files for downstream analysis along with summarized QC indicators.
Example primary non-demultiplexed FASTQ files provided here were used to generate GSM5493452-GSM5493463 (H3K27m3) and GSM5823907-GSM5823918 (Input), deposited on GEO with the minute pipeline all together under series GSE181241.
For more information about MINUTE-ChIP, you can check the publication relevant to this dataset:
Kumar, Banushree, et al. "Polycomb repressive complex 2 shields naïve human pluripotent cells from trophectoderm differentiation." <em>Nature Cell Biology</em> 24.6 (2022): 845-857.
If you want more information about the minute pipeline, there is a public biorXiv and a GitHub repository and official documentation.
提供机构：
Karolinska Institutet
创建时间：
2024-05-07
