Predicted ORF and summaries of genetic variants within QTL regions.

For each gene, the number of genetic variants within and upstream of a predicted gene is provided. For each gene the upstream distance from the 5’ UTR was taken as the intergenic distance (maximum 500 bp) between flanking genes on the same strand. For those genes containing genetic variants the predicted protein length of the reference strain JEC21α, parental strain XL280a, and the parental strain 431α is listed. The number of predicted stop-codons in the parental strains, non-synonymous changes, and variants within UTRs, exons and introns are also listed. Gene names are given in the C. deneoformans reference strain JEC21α background [208]. The position and strand are relative to the XL280α strain [137].
(CSV)