OCT Mouse Brain Templates

These brain templates were created by combining 4 mouse brains acquired with a serial optical coherence tomography scanner (SOCS). The Advanced Normalization Tools (ANTs) were used to created the normalized brains. The templates were also co-registered to the Allen mouse Common Coordinate Framework (CCF). The local attenuation contrast was computed from the OCT reflectivity contrast using a single-scattered photon model. These brains were sub-sampled to an isotropic resolution of 50 microns / voxel.

More details about the OCT volume reconstruction, template creation and other associated methods are described in the publication listed with this dataset. Please cite both this publication and the dataset reference if you use this data in your own work.

本数据集之脑模板系通过融合由串行光学相干断层扫描仪（SOCS）获取的4只小鼠脑组织而成。采用高级归一化工具（ANTs）对脑组织进行归一化处理。此外，模板与艾伦小鼠通用坐标系框架（CCF）进行了对齐。通过单散射光子模型，从光学相干断层扫描（OCT）的反射率对比度计算了局部衰减对比度。这些脑组织样本被下采样至各向同性分辨率为50微米/体素的水平。关于OCT体积重建、模板制作及其他相关方法的详细描述，请参阅随本数据集一同提供的出版物。若您在使用本数据时引用，请同时引用该出版物及数据集参考文献。