Data from: Leap-frog dispersal and mitochondrial introgression: phylogenomics and biogeography of Limnonectes fanged frogs in the Lesser Sundas Archipelago of Wallacea

Limnonectes 16S mitochondrial DNA alignment16S mitochondrial DNA alignment for Limnonectes kadarsani, L. dammermani, and L. microdiscus.Limnonectes_16S.nexLimnonectes Exon-Capture alignmentA concatenated phylip alignment file of 974 genes (exons+introns) for Limnonectes kadarsani, L. dammermani, and L. microdiscus. These data were collected using MYbaits in-solution exon-capture experiment.Limno_Exon-Capture.phylipASTRAL Input TreesIndividual RAxML phylogenies for 974 genes that are used as the input for the summary coalescent software ASTRAL-II.Limno_TF_refined_ASTRAL_input.treG-PhoCS Input FileIndividual alignments for the flanking regions (introns) of 659 genes used as the input file for demographic analyses performed by the software G-PhoCS.Limno_GPhocsInput.alnScaled Distances for BioGeoBears analysisScaled geographic distances between islands or island regions for biogeographical model testing analyses in BioGeoBears.geographic-distances-scaled.txtDefined areas for BioGeoBearsThe defined islands or island regions used in biogeographical model testing analyses for BioGeoBears.geographicAreas.txtGuide tree for BioGeoBearsAn ultrametric tree of the relationships between major clades of Limnonectes from the Lesser Sundas used as a guide tree for biogeographical model testing analyses in BioGeoBears.clade-tree-ultrametric.treBioGeoBears Model 1The stepping-stone model tested in BioGeoBears.model1-steppingstone.txtBioGeoBears Model 2The BioGeoBears model allowing stepping-stone plus one leap-frog dispersals.model2-steppingstone+1leapfrog.txtBioGeoBears Model 3The BioGeoBears model allowing stepping-stone plus one or two leap-frog dispersals.model3-steppingstone+1leapfrog+2leapfrog.txtBioGeoBears Model 4The BioGeoBears model allowing stepping-stone plus up to three leap-frog dispersals.model4-steppingstone+1leapfrog+2leapfrog+3leapfrog.txtBioGeoBears Model 5The BioGeoBears model allowing stepping-stone plus up to four leap-frog dispersals.model5-steppingstone+1leapfrog+2leapfrog+3leapfrog+4leapfrog.txt