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Data from: Draft genome sequence of Xylaria sp., the causal agent of taproot decline of soybean in the southern United States

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agdatacommons.nal.usda.gov2024-02-08 更新2025-01-15 收录
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https://agdatacommons.nal.usda.gov/articles/dataset/Data_from_Draft_genome_sequence_of_Xylaria_sp_the_causal_agent_of_taproot_decline_of_soybean_in_the_southern_United_States/24852603/1
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The draft genome of Xylaria sp. isolate MSU_SB201401, causal agent of taproot decline of soybean in the southern U.S., is presented here. The genome assembly was 56.7 Mb in size with an L50 of 246. A total of 10,880 putative protein-encoding genes were predicted, including 647 genes encoding carbohydrate-active enzymes and 1053 genes encoding secreted proteins. This is the first draft genome of a plant-pathogenic Xylaria sp. associated with soybean. The draft genome of Xylaria sp. isolate MSU_SB201401 will provide an important resource for future experiments to determine the molecular basis of pathogenesis. The whole genome shotgun project of Xylaria sp. isolate MSU_SB201401 has been deposited at DDBJ/ENA/GenBank under the accession number NPFG00000000; the version described in this paper is version NPFG01000000. Resources in this dataset:Resource Title: Draft genome sequence of Xylaria sp., the causal agent of taproot decline of soybean in the southern United States. File Name: Web Page, url: https://www.sciencedirect.com/science/article/pii/S2352340917307552 Data in Brief presenting draft genome assembly and gene annotation of Xylaria sp. isolate MSU_SB201401, causal agent of taproot decline of soybean in the southern U.S.

本文呈现了美国南部大豆根腐病的病原菌 Xylaria sp. 分离株 MSU_SB201401 的基因组草图。该基因组组装大小为 56.7 Mb,L50 值为 246。共预测出 10,880 个潜在的蛋白质编码基因,其中包括编码碳水化合物活性酶的 647 个基因和编码分泌蛋白的 1053 个基因。这是首次公布与大豆相关的植物病原菌 Xylaria sp. 的基因组草图。Xylaria sp. 分离株 MSU_SB201401 的基因组草图将为未来研究病原性分子基础的重要实验提供宝贵资源。Xylaria sp. 分离株 MSU_SB201401 的全基因组鸟枪法测序项目已存入 DDBJ/ENA/GenBank,登录号为 NPFG00000000;本文描述的版本为 NPFG01000000。本数据集包含以下资源:资源标题:美国南部大豆根腐病病原菌 Xylaria sp. 的基因组草图。文件名:网页,URL:https://www.sciencedirect.com/science/article/pii/S2352340917307552,数据简报展示了 Xylaria sp. 分离株 MSU_SB201401 的基因组组装和基因注释。
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