Summary of predicted 95 FReD proteins in B. glabrata BB02 strain in details.

Notes: 1. In the column of “ID in text”, multiple proteins encoded by the same gene due to alternative splicing were differentiated by different version of protein, such as “-PA”, “-PB”, “-PC”, “-PD” or “-PE” suffix following the gene ID. 2. In the column of “NCBI Annotation”, “—” represents no available annotation for a particular protein; 3. In the column of “Type of FReD”, each particular FReD was considered as complete or partial based on the criteria set in this study above; “1-IgSF FREP” and “2-IgSF FREP” represent the number of IgSF domains present in a particular FREP; 4. “Best hit to published FREP” represent the best hit of individual protein against published B. glabrata FREP sequences from available sources [30,32–34]: best hit of protein sequence identity ≥90% is considered as the same FREP; identity 85~90% is considered as “-like” of the corresponding FREP; identity IgSF2 length (aa)", texts in red indicate truncated domains, which are possible to be extended to complete domains with improved assembly or annotation; text in blue indicates a residue of IgSF domain, which is not likely to be extended to a complete domain due to the location between two complete domains; 6. Asterisk marked 4 FREPs IDs in the first two columns were extended sequences after manual checking. 7. The highlighted gene "Bg6034" is a partial 2-IgSF FREP with disrupted architecture: the partial FBG domain was not located at C terminal but inserted into the IgSF2 domain, which was broken into two parts. From the VectorBase genome browser view, there is a gene with 7 exons spans over two contigs APKA01042331.1 (exon 4–7) and APKA01042332.1 (exon 1–3). This unusual gene sequence is most likely a genome assembly error; no matching sequences of transcripts were found among the transcripts from 12 different B. glabrata organs [32]. (XLSX)