Immune-modulating poxviruses shift the mice gut microbiome

Here we employed 16S rRNA amplicon sequencing and transcriptome profiling as proxies for microbiota composition and gut immunophysiological status, and analyzed caecal samples from control mice and mice infected with various poxvirus types. 16S Data: Sample Experimental group 1 EdCrmD 2 EdCrmD 3 EdCrmD 4 EdCrmD 5 EdCrmD 6 EdCrmDd7 7 EdCrmDd7 8 EdCrmDd7 9 EdCrmDd7 10 Ewt 11 Ewt 12 Ewt 13 Ewt 14 Ewt 15 EwtD7 16 EwtD7 17 EwtD7 18 EwtD7 19 Mock 20 Mock 21 Mock 22 Mock 23 Mock 24 VdB18 25 VdB18 26 VdB18 27 VdB18 28 VdB18D5 29 VdB18D5 30 VdB18D5 31 VdB18D5 32 VdB18D5 33 Vwt 34 Vwt 35 Vwt 36 Vwt 37 Vwt 38 VwtD5 39 VwtD5 40 VwtD5 41 VwtD5 42 EctoWtb 43 EctoWtb 44 EctoWtb 45 EctoWtb 46 EctoWtb 47 EctroDeltaCrmDb 48 EctroDeltaCrmDb 49 EctroDeltaCrmDb 50 EctroDeltaCrmDb 51 EctroDeltaCrmDb 52 Mockb 53 Mockb 54 Mockb 55 Mockb 56 Mockb 57 VacDeltaB18b 58 VacDeltaB18b 59 VacDeltaB18b 60 VacWtb 61 VacWtb 62 VacWtb 63 VacWtb 64 VacWtb Transcriptomes: Sample ExperimentalGroup transcriptome1 untreated transcriptome10 E-wt transcriptome11 E-CrmD transcriptome12 untreated transcriptome13 untreated transcriptome14 V-wt transcriptome15 V-B18 transcriptome16 V-B18 transcriptome17 E-CrmD transcriptome18 V-wt transcriptome19 untreated transcriptome2 E-CrmD transcriptome20 untreated transcriptome21 V-wt transcriptome22 E-CrmD transcriptome23 E-CrmD transcriptome24 E-CrmD transcriptome25 V-wt transcriptome26 untreated transcriptome27 V-B18 transcriptome28 E-wt transcriptome29 V-B18 transcriptome3 V-wt transcriptome30 V-B18 transcriptome4 E-wt transcriptome5 V-B18 transcriptome6 E-wt transcriptome7 E-wt transcriptome8 E-wt transcriptome9 V-wt