Singularity pre-compiled BASALT package (v1.1.0)

This is a singularity pre-compiled BASALT package (v1.1.0). Users can download this file to run BASALT with singularity directly without any installation.Tutorial:Download split 'BASALT.sif' file to your desired directory and merge split files using 'cat':<br><br>$ cat BASALT.sif_part* &gt; BASALT.sif<br>If the 'BASALT.sif' file is under '/home' path, run BASALT with:<br><br>$ singularity run BASALT.sif BASALT [-COMMANDS]<br><br>alternatively, for the 'BASALT.sif' file located elsewhere, run BASALT with:<br><br>$ singularity run -B [PATH_TO_BASALT.sif] BASALT.sif BASALT [-COMMANDS]<br>BASALT singularity version can run smoothly in PBS systems via job submission. However, it may stop when running in the background (e.g., using nohup). To avoid this issue, you can use screen to run BASALT with commands written in a bash file, for example:<br><br>$ screen -dmS [SESSION_NAME] bash -c 'bash BASALT.sh &gt; BASALT.log'<br><br>where the 'BASALT.sh' file contains your customised BASALT commands.<br>The pre-compiled BASALT.sif contains all required software. You can also run these software using BASALT.sif, for example:<br><br>$ singularity run BASALT.sif bowtie2<br>$ singularity run BASALT.sif checkm2<br>