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OTU table

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DataCite Commons2020-08-27 更新2024-07-27 收录
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https://figshare.com/articles/OTU_table/7551026
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资源简介:
Number of sequences of each Operational Taxonomic Units (OTUs) recovered from stomach content analysis of <i>Chromis viridis </i>(n=27), <i>Dascyllus flavicaudus </i>(n=34) and <i>Pocillopora eydouxi </i>(n=3) using metabarcoding sequencing of the mitochondrial Cytochrome c Oxidase Subunit I (COI). <br>Column "Source ID": An OTU was considered to match a reference sequence in the Moorea BIOCODE database, GenBank or BOLD if the level of similarity was higher than 97% (BIOCODE: &gt;97% similarity to BIOCODE reference barcode; Match: &gt;97% similarity to GenBank or BOLD reference barcode). OTUs with &lt;97% similarity to reference COI barcodes were assigned (and labeled as "Assigned" in Column "Source ID") to phyla using a Bayesian phylogenetic approach implemented in the Statistical Assignment Package (SAP) and closest Blast hits (if &gt;85% similarity, see Methods section). OTUs that could not be confidently assigned using any of the methods above were labelled “NoMatch”.
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figshare
创建时间:
2019-01-07
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