Chicken 3D genome research

NIAID Data Ecosystem2026-03-13 收录

三维基因组结构

表观遗传图谱

数据链接：

https://www.ncbi.nlm.nih.gov/bioproject/PRJNA834620 数据链接链接失效反馈

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资源简介：

In this project we are studying 3D organization and epigenetic profile of chicken genome using NGS and Nanopore sequencing

创建时间：

2022-05-03

An epigenetic profile of early T-cell development from multipotent progenitors to committed T-cell descendants.

T细胞早期分化

表观遗传图谱

Using a stromal cell free system, we described the gene expression and two genome wide epigenetic profiles of a unique population of undifferentiated bone marrow cells selectively driven towards the T

NIAID Data Ecosystem50

The nuclear matrix associating protein HNRNPU functions as a key regulator of 3D genome architecture [Hi-C]

三维基因组结构

染色质互作

Higher-order chromatin conformation plays critical role in regulating gene expression and biological development, here we show that HNRNPU, a nuclear matrix attachment factor, is a regulator of 3D gen

NIAID Data Ecosystem30

HiC sequencing of Arabidopsis suecica, A. thaliana, A. arenosa and synthetic A. suecica

三维基因组结构

多倍体化效应

Polyploidy is associated with rearrangements and changes to 3D genome structure. Thus we examined Arabidopsis suecica, its ancestral species and synthetic A. suecica

NIAID Data Ecosystem30

Diurnal 3D genome organization remodeling orchestrates rhythmic gene expression in rice [RNA-Seq]

植物昼夜节律

三维基因组结构

Genome-wide rhythmic modulation of RNAPII occupancy and histone acetylation modifications are highly coordinated with rhythmic gene expression, and dynamically modulates diurnal 3D genome architecture

NIAID Data Ecosystem30

HiChIP: Efficient and sensitive analysis of protein-directed genome architecture

三维基因组结构

染色质构象

Three-dimensional genome structure is central to gene control, but current technologies are often impractical for many biological questions due to cell and read number requirements. Here we present Hi

NIAID Data Ecosystem30

Chicken 3D genome research

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