184 mandarin genotype data

The GBS sequencing of 240 mandarin samples produced 96.3 Gb of high quality se-quence data (Q20≥93.78%, Q30≥85.19%), the GC distribution was normal, and the average comparison rate between the population sample and the reference genome of Clementina was 93.79%. After filtering at a 4× sequencing depth, miss 0.2, and a minor allele frequency (MAF) > 0.01, 114,200 high-quality SNPs were obtained. Then, 112,768 high-quality SNPs of 184 mandarins were extracted from the simplified ge-nomes of 240 mandarins (reference genome: https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000493195.1_Citrus_clementina_v1.0) by PLINK1.9 software.

对240个柑橘样本进行的GBS测序产生了96.3吉字节的高质量序列数据（Q20≥93.78%，Q30≥85.19%），其GC分布均匀，且与克莱门蒂娜参考基因组（参考基因组：https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000493195.1_Citrus_clementina_v1.0）的种群样本比较率平均达到93.79%。经过4倍测序深度过滤、缺失率降至0.2以及次要等位基因频率（MAF）大于0.01的筛选后，获得了114,200个高质量的单核苷酸多态性（SNP）。随后，通过PLINK1.9软件从240个柑橘的简化基因组中提取了184个柑橘的高质量SNP，共计112,768个。