Additional file 2 of Integrative single-cell transcriptomic analyses reveal the cellular ontological and functional heterogeneities of primary and metastatic liver tumors

Additional file 2: Table S1. Clinical characteristics of enrolled patients. Table S2. Statistics of single-cell RNA sequencing data. Table S3. Cell count across patients and tissue types and marker genes of 49 cell clusters. Table S4. Pathway enrichment analyses in cell clusters. Table S5. The characterized CD8+ T cells pre-defined by a previous study. Table S6. Transcription factors activity analyses in this article. Table S7. Differentially expressed genes between the TCF7+ CD8+ memory T cells and the other memory CD8+ T cells. Table S8. Differentially expressed genes between the WDR45B+ TAMs cells and the other TAMs. Table S9. Significantly enriched L–R interactions in NT, PT and MT. Table S10. Marker genes of candidate cell types or signatures.