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5mC detection from Nanopore sequencing reads of plants

NIAID Data Ecosystem2026-03-12 收录

植物DNA甲基化检测

Nanopore测序表观遗传学

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP337810 数据链接链接失效反馈

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资源简介：

n this study, we sequenced Nanopore and bisulfite whole-genome reads of A. thaliana and O. sativa.

应用场景：

创建时间：

2021-09-24

植物DNA甲基化检测

单分子表观遗传分析

we developed a chemoenzymatic procedure to fluorescently label non-methylated cytosines in the CpG context allowing epigenetic profiling of single DNA molecules spanning hundreds of thousands of base

NIAID Data Ecosystem90

Eragrostis curvula samples treated with different ezymes to use in McSEed pipeline

植物DNA甲基化检测

表观遗传基因型分析

To detect differentially methylated positions in E. curvula genotypes Victoria, Bahiense, Tanganyika INTA and T9355, DNA was extracted from infloresences in triplicates and treated with different enzy

NIAID Data Ecosystem70

processed datasets of deepsignal-plant

植物DNA甲基化检测

深度学习基因组学

processed datasets of deepsignal-plant

NIAID Data Ecosystem40

Efficient and accurate determination of genome-wide DNA methylation patterns in Arabidopsis thaliana with enzymatic methyl sequencing

植物DNA甲基化检测

表观遗传学测序

5' methylation of cytosines in DNA molecules is an important epigenetic mark in eukaryotes. Bisulfite sequencing is the gold standard of DNA methylation detection, and whole-genome bisulfite sequencin

NIAID Data Ecosystem80

MS-DArT-seq - BRASUZ1 files

甲基敏感DArT测序

植物DNA甲基化检测

Input files to support the paper: "A cost-effective approach to DNA methylation detection by Methyl Sensitive DArT sequencing." The code to reproduce the results presented in the paper can be find

Figshare2020-05-18 更新50

5mC detection from Nanopore sequencing reads of plants

资源简介：

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