Phylograms and dataset used for the identification of genome sequenced strains published in the journals Genome Announcements and Microbiology Resource Announcement.
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<b>Dataset and phylograms. </b><br> <b>Suppl. Table 1.</b> Overview of genome sequenced <i>Eurotiales </i>published in Genome Announcements and Microbiology Resource Announcements (until February 2021).<br><br><b>Suppl. Dataset 1.</b> Partial calmodulin sequence alignment used for the construction of Suppl. Fig. 1 (<i>Aspergillus</i>).<br><b>Suppl. Dataset 2.</b> Partial beta-tubulin sequence alignment used for the construction of Suppl. Fig. 2 (<i>Penicillium</i>).<br><br><b>Suppl. Dataset 3.</b> Partial beta-tubulin sequence alignment used for the construction of Suppl. Fig. 3 (other <i>Eurotiales, </i>e.g. <i>Monascus, Paecilomyces</i>).<br><br><b>Suppl. Treefile 1. </b>Treefile generated by RAxML based on the analysis of partial calmodulin gene sequences (see Suppl. Dataset 1) and used for the preparation of Suppl. Fig. 1 (phylogeny <i>Aspergillus</i>).<br><br><b>Suppl. Treefile 2. </b>Treefile generated by RAxML based on the analysis of partial beta-tubulin gene sequences (see Suppl. Dataset 2) and used for the preparation of Suppl. Fig. 2 (phylogeny <i>Penicillium</i>).<br><b><br></b><b>Suppl. Treefile 3. </b>Treefile generated by RAxML based on the analysis of partial beta-tubulin gene sequences (see Suppl. Dataset 3) and used for the preparation of Suppl. Fig. 3 (phylogeny misc. genera).<br><br><b>Suppl. Fig. 1. </b>Phylogram based on partial calmodulin (<i>CaM</i>) gene sequences used for the identification of genome sequenced <i>Aspergillus </i>species published in the journals Genome Announcements and Microbiology Resource Announcements. Only misidentified genome sequenced strains are included and highlighted in red; the other strains are from the reference dataset described in Houbraken et al. (2020)[Studies in Mycology 95: 5–169]. The bootstrap percentages of the maximum likelihood (ML, RAxML) analysis are presented at the nodes; values less than 70 % bootstrap support are not shown.<br><b>Suppl. Fig. 2. </b>Phylogram based on partial beta-tubulin (<i>BenA</i>) gene sequences used for the identification of genome sequenced <i>Penicillium </i>species published in the journals Genome Announcements and Microbiology Resource Announcements. Only misidentified genome sequenced strains are included and highlighted in red; the other strains are from the reference dataset described in Houbraken et al. (2020)[Studies in Mycology 95: 5–169]. The bootstrap percentages of the maximum likelihood (ML, RAxML) analysis are presented at the nodes; values less than 70 % bootstrap support are not shown.<br><br><b>Suppl. Fig. 3. </b>Phylogram based on partial beta-tubulin (<i>BenA</i>) gene sequences (see Suppl. Dataset 3) used for the identification of genome sequenced <i>Eurotiales </i>(other than<i> Aspergillus </i>and <i>Penicillium</i>) species published in the journals Genome Announcements and Microbiology Resource Announcements. Only misidentified genome sequenced strains are included and highlighted in red; the other strains are from the reference dataset described in Houbraken et al. (2020)[Studies in Mycology 95: 5–169]. The bootstrap percentages of the maximum likelihood (ML, RAxML) analysis are presented at the nodes; values less than 70 % bootstrap support are not shown.<br>
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figshare
创建时间:
2020-09-22



