List of differentially expressed genes in the Reg1+/– vs. WT comparison across various cell types identified by scRNA-seq.

Based on the scRNA-seq results, we summed the total reads for each cell type across 0, 3 and 5 dpi and compared gene expression between WT and Reg1+/– mice. The table lists genes that were upregulated in Reg1+/– mice, ranked by fold change. T cells represent the sum of clusters 1, 6, 7, and 12 in Fig 3A. B cells represent the sum of clusters 2 and 22 in Fig 3A. NK cells represent cluster 3 in Fig 3A. Monocytes/macrophages are the sum of clusters 4, 8, 11, 15 and 20 in Fig 3A. Alveolar macrophages represent the sum of clusters 5 and 14 in Fig 3A. pDCs represent cluster 10 in Fig 3A. (XLSX)