Additional file 2 of Skeletal muscle and cardiac transcriptomics of a regionally endothermic fish, the Pacific bluefin tuna, Thunnus orientalis

Additional file 2: Table S1. Expression of candidate endothermy and cardiac performance genes, identified from literature and selection analyses in tuna. All isoforms of each to be present in reference assembly are presented, along with the number of clusters after clustering corresponding to each, and the pairwise comparisons in which they are upregulated. Abbreviations: RM - red muscle, WM - white muscle, SR - superficial red muscle, DR - deep red muscle, SW - superficial white muscle, DW - deep white muscle, At - atrium, Ve - Ventricle. Table S2. All Gene Ontology (GO) terms and KEGG pathways enriched in each pairwise analysis. Table S3. All genes with KEGG annotations for major metabolic pathway in any of the muscle comparisons, or metabolic pathways or cardiac contraction in the cardiac comparisons. Abbreviations: RM - red muscle, WM - white muscle, SR - superficial red muscle, DR - deep red muscle, SW - superficial white muscle, DW - deep white muscle, At - atrium, Ve - Ventricle.