MOESM3 of Trichoderma reesei complete genome sequence, repeat-induced point mutation, and partitioning of CAZyme gene clusters

Additional file 3: Table C1. Straw-induced QM6a-v2.0 genes identified by Ries et al. [24] and their TPM values. Table C2. Straw-induced QM6a-v2.0 genes not identified by Ries et al. [24] and their TPM values. Table C3. New QM6a genes that are highly induced (≥ 20-fold) by straw and their TPM values. Table C4. New QM6a genes that are significantly induced (5-20-fold) by straw and their TPM values. Table C4. Two new QM6a genes that are highly induced by cellulose and their TPM values. Table C5. Nine new genes having higher TPM values in QM6a than in QM9414. Table C6. Centromere-encoded genes and their TPMs in QM9414.