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Whole genome population structure of North Atlantic kelp confirms high-latitude glacial refugia

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DataCite Commons2023-01-24 更新2024-08-18 收录
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https://figshare.com/articles/dataset/GENOME_SCALE_POPULATION_STRUCTURE_OF_HIGH_LATITUDE_KELP_REVEALS_MULTIPLE_GLACIAL_REFUGIAL_ORIGINS_ANCIENT_MIXING_AND_POTENTIAL_SELECTIVE_SWEEPS/16712797/4
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Presented here are files related the genome assembly of the kelp <em>Alaria esculenta</em> using long and short read data, and population genomic analysis of North Atlantic populations. The specific files are: <br> <em><strong>Alaria esculenta</strong></em><strong> draft genome:</strong> alaria_v3.fasta: Final assembly contigs<br> alaria_v3.gff3: Final assembly annotations <br> Alaria_esculenta_V1_repetitive_regions.out (note, contains annotations for sequences in our initial draft genome, from which we have sinced removed putative non-target sequences)<br> <strong>Population genomic analyses:</strong> A_esculenta_coverage_exon-gene_annotations_30vi22.xlsx: presents exon coverage values for each population. Note, coverage is standardized within each sample for expected coverage of single copy orthologues; 0=missing, 1=expected coverage, &gt;1=greater coverage relative to single copy orthologues (where 2=2x, 3=3x, ect).
提供机构:
figshare
创建时间:
2023-01-24
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