Allen Cell Imaging Collections

This bucket contains multiple datasets (as Quilt packages) created by the Allen Institute for Cell Science. The types of data included in this bucket are listed below:<ol> <li>Field of view or cropped images of cells</li> <li>Segmentations of structures in the images (e.g., boundaries of cells, DNA, other intracellular structures, etc.)</li> <li>Processed versions of the above images and segmentations</li> <li>Machine learning predictions and labels of the data listed above</li> <li>Models trained on the previously listed data</li> <li>Additional supporting non-image data related to the above listed data types (e.g., gene expression data, whole genome sequencing data, features derived from the images or model predictions, metadata)</li> <li>Simulation, analysis, and visualization data of in silico cell structures, cells, and cell populations</li> </ol> External funding:The generation of some datasets was supported by the National Human Genome Research Institute of the National Institutes under Award Number UM1HG011593. The content is solely the responsibility of the authors and does not necessarily represent the official views of the National Institutes of Health.

本存储桶包含由艾伦细胞科学研究所创建的多个数据集（以Quilt包的形式）。其中包含的数据类型如下：<ol> <li>细胞视野或裁剪后的细胞图像</li> <li>图像中结构的分割（例如，细胞的边界、DNA、其他细胞内结构等）</li> <li>上述图像和分割的加工版本</li> <li>上述数据的机器学习预测和标签</li> <li>基于先前列出数据的训练模型</li> <li>与上述数据类型相关的附加支持性非图像数据（例如，基因表达数据、全基因组测序数据、从图像或模型预测中提取的特征，元数据）</li> <li>关于模拟、分析和可视化的虚拟细胞结构、细胞和细胞群体的数据</li> </ol> 外部资助：部分数据集的生成得到了国家卫生研究院下属的国家人类基因组研究所在编号为UM1HG011593的奖项支持。内容仅由作者负责，并不必然代表国家卫生研究院的官方观点。

搜集汇总

背景与挑战

背景概述

Allen Cell Imaging Collections是一个包含多种细胞生物学数据的开放数据集，涵盖细胞图像、结构分割、机器学习模型等，由Allen Institute for Cell Science维护，更新频率为双周。