Example data set for the ChIPexo Pipeline

NIAID Data Ecosystem2026-03-11 收录

ChIP-exo技术

蛋白质-DNA互作

数据链接：

https://zenodo.org/record/3242509 数据链接链接失效反馈

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资源简介：

Example data set for the ChIP-exo Analytical Pipeline available through GitHub https://github.com/SysBioChalmers/ChIPexo_Pipeline

创建时间：

2020-05-20

MOESM4 of Spermatid-specific linker histone HILS1 is a poor condenser of DNA and chromatin and preferentially associates with LINE-1 elements

精子发生

蛋白质-DNA互作

Additional file 4: Table S3. Chromosome-wise peak length of HILS1 peaks. Excel file represents the length of HILS1 peaks across the chromosomes confirming their broad nature

Figshare2018-08-02 更新80

DNB-Based On-Chip Motif Finding (DocMF): a High-Throughput Method to Profile Different Types of Protein-DNA Interactions

CRISPRPAM序列鉴定

蛋白质-DNA互作

DNA-protein interactions play pivotal roles in many cellular activities, such as replication, development, and DNA repair. Here we report a DNB-based on-chip Motif Finding (DocMF) system that utilizes

DataCite Commons2021-05-08 更新40

CUT&RUN to map WT1 binding in M15 cell lines that are genome edited for the KTS isoforms.

基因编辑与功能验证

蛋白质-DNA互作

throughput profiling of WT1 in M15 mouse mesonephric cells and M15 genome edited for the KTS isoforms. The genome-edited lines were derived from the M15 cells by transfection and puromycin selection o

NIAID Data Ecosystem30

Chua et al. 2024 Kymographs of MeCP2 on DNA

蛋白质-DNA互作

Rett综合征分子病理机制

Full kymographs of MeCP2 and RTT mutants on DNA. Associated with manuscript by Chua et al. 2024.

Zenodo2024-06-18 更新50

Control ChIP-seq from whole organism (ENCSR523RCF)

表观遗传调控

蛋白质-DNA互作

This is the ChIP-seq control of transgenic worms expressing HIF-1-eGFP fusion proteins. For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/P

NIAID Data Ecosystem30

Example data set for the ChIPexo Pipeline

资源简介：

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