Phylogenetic analysis of 201 HIV-1 full-length proteome sequences derived from IAVI protocol C.
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Single genome nucleotide sequences for each viral gene (gag, pol, vif, vpr, vpu, tat, rev, env, & nef) were translated to amino acids, concatenated, aligned with LANL consensus/ancestral sequences and a maximum likelihood tree generated. Transmitted/founder sequences of subtype A are shown in red, subtype B in blue, subtype C in purple, subtype D in green and unique recombinant forms in grey. Infectious molecular clones in the LucR VIA are highlighted with a pink circle. Subtype references are highlighted with a black circle. (TIF)
创建时间：
2021-11-17
