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Makeup of the BioPAX models from three resources (PID, KEGG, ACSN).

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https://figshare.com/articles/dataset/Makeup_of_the_BioPAX_models_from_three_resources_PID_KEGG_ACSN_/20062795
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The BioPAX files of the three resources were parsed in order to identify Physical Entities, Controls (Catalysis and TemplateReactionRegulation) and Reactions (Conversion and TemplateReaction). For the ACSN resources, Physical Entities were curated in order to reanotate their types when possible. The curation processes focused on compressing duplicate entities and creating controls (with the type catalysis) for reactions where a reactant is also a product.
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2022-06-13
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