Host and pathogen gene expression profiles in Necrotizing Soft Tissue Infections
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Data underlying the article
Analysis of host-pathogen gene association networks reveals patient-specific response to streptococcal and poly-microbial necrotizing soft tissue infections
Sanjeevan Jahagirdar1, Lorna Morris2, Nirupama Benis3, Oddvar Oppegaard4, Mattias Svenson5, Ole Hyldegaard6, Steinar Skrede4,7, Anna Norrby-Teglund5, INFECT Study group, Vitor A. P. Martins dos Santos1,2, Edoardo Saccenti1*
Contains
Data described in 4.3.2 Sample Selection and in Figure 6:
INFECT_DualRNASeq_norm_counts_Human.txt Normalised counts from Kallisto mapping to GRCh38 (release 91) for 81 NSTI patients
INFECT_DualRNASeq_relative_abundance_Bacteria.txt Relative abundance for all species from HumanN2 mapping for 81 NSTI patients
BStrep_filtered_D1 - INFECT_DualRNASeq_relative_abundance_Bacteria.txt filtered for samples classified as Streptococcal from Thänert et al (2019) taken on the day of admission (day 1).
BPoly_filtered_D1 - INFECT_DualRNASeq_relative_abundance_Bacteria.txt filtered for samples classified as polymicrobial from Thänert et al (2019) taken on the day of admission (day 1).
HStrep_filtered_D1 - INFECT_DualRNASeq_norm_counts_Human.txt filtered for samples classified as Streptococcal from Thänert et al (2019) taken on the day of admission (day 1).
HPoly_filtered_D1 - INFECT_DualRNASeq_norm_counts_Human.txt filtered for samples classified as polymicrobial from Thänert et al (2019) taken on the day of admission (day 1).
创建时间：
2022-04-12
