CyTOF Dataset for Plerixafor and Cemiplimab in Metastatic PDAC

This repository includes all relevant suspension mass cytometry files - all raw FCS files and two fully annotated datasets (backup_output.rds for myeloid cells and backup_output.rds for T cells) for single-cell analysis in "A phase 2 trial of CXCR4 antagonism and PD1 inhibition in metastatic pancreatic adenocarcinoma reveals recruitment of T cells but also immunosuppressive macrophages". R scripts and relevant configuration files used for the analysis of this dataset are available on github.com/wjhlab/J19113CyTOF.