Multiple lineage progenitors converge to specify the mammalian germline

Input and intermediate data for the analysis code at https://github.com/dango147/PGC_Origins, which characterises primordial germ cell subtypes in a pig gastrulation and early organogenesis single-cell atlas. Includes the CellRanger filtered matrices for 24 pig embryo samples, the annotated Seurat object with cell type labels, the barcode and feature lists needed to reproduce the published clustering, the reference object used for label transfer, and the cisTarget databases and motif annotations used to run pySCENIC for pig and macaque. Raw sequencing data for the pig samples are at GEO under accession GSE236766, deposited with Simpson et al., Nature Communications 15:5210 (2024). The reads were reprocessed here through a separate CellRanger run. Comparison datasets from other species are not included and should be obtained from their original sources, listed in the repository README.The cisTarget ranking databases were built with create_cisTarget_databases using the v10nr_clust_public motif collection from https://resources.aertslab.org/cistarget/motif_collections/v10nr_clust_public/