Data and code for “A public-data workflow for species-resolved microbiome candidate prioritisation in alcohol-associated hepatitis”

This dataset supports a public-data workflow for species-resolved microbiome candidate prioritisation in alcohol-associated hepatitis. It contains the R and Python code, distributable inputs, intermediate tables and derived results used for species filtering, rule-matched membership checks, metabolite and target organisation, enrichment and network analysis, supplementary molecular docking, liver-transcriptome support and reconstruction of the seven current manuscript figures. The code package also retains the earlier six-figure analytical-source build. The systematic-review files use the author-approved inventory of 22 reports and 24 comparison rows and the corrected PRISMA count of 161 full-text exclusions. GeneCards raw or score-bearing material and CTD raw or row-level exports are excluded because redistribution rights were not established. The authors' original data content is released under CC BY 4.0; original code is released under the MIT License; third-party content remains subject to its source terms.