Additional file 2 of Strengthening insights into host responses to mastitis infection in ruminants by combining heterogeneous microarray data sources

Additional file 2:Lists of all affected canonical pathways and corresponding affected genes. Complete lists of affected canonical pathways (p < 0.05) and corresponding affected genes identified with IPA for the meta-analysis combinations (I) overall response, (II) early stage response, (III) late stage response, (IV) cattle-specific response, (V) early specific response and (VI) late specific response, as well as for the common affected genes between the 4 meta-analysis responses (I) to (IV) (Figure 3, n = 92). The identified canonical pathways are listed from the lowest to the highest p-value. An asterisk indicates that the pathway approached statistical significance (0.05